All probes

ML155 : GBA (Glucocerebrosidase (N370S mutant)) Modulator

ML155

ML155

Target Name

Glucocerebrosidase (N370S mutant)

Target Alias

GBA

Target Class

Hydrolase

Mechanism of Action

Modulator of GBA

Biological / Disease Relevance

Gaucher; ER-lysosomal trafficking; chaperone of glucocerobrosidase

In vitro activity
N370S GC bioassay (IC50)
330 nM
Cellular activity
Chaperone activity assay (IC50)
500 nM

Target Information

The probe is able to inhibit the hydrolytic activity of the N370S mutant form of glucocerebrosidase, as well as wild type glucocerebrosidase, in tissue homogenate assays. The probe does not inhibit purified glucocerebrosidase, but the cellular activity of the enzyme is known to be dependent on interactions with other factors, such as Saposin C. Importantly, the probe increased glucocerebrosidase translocation to the lysosome in Gaucher patient-derived fibroblasts homozygous for the N370S mutation, and can be used to study ER-lysosomal trafficking of clinically relevant GC mutants in vitro. This probe may be a useful lead for the clinical development of a chemical chaperone of glucocerebrosidase.

Properties

ML155

NCGC00182292

Physical & chemical properties
Molecular Weight 486.6 g/mol
Molecular Formula C26H22N4O2S2
cLogP 5.2
PSA 103 Ų
Storage
Solubility
CAS Number 10 mM in DMSO

SMILES:
O=S(N1CCN(C2=NC(C3=CC=CS3)=NC4=C2C=CC=C4)CC1)(C5=CC6=CC=CC=C6C=C5)=O

InChI:
1S/C26H22N4O2S2/c31-34(32,21-12-11-19-6-1-2-7-20(19)18-21)30-15-13-29(14-16-30)26-22-8-3-4-9-23(22)27-25(28-26)24-10-5-17-33-24/h1-12,17-18H,13-16H2

InChIKey:
UREJDUPKGMFJRU-UHFFFAOYSA-N

Activity

Summary activity statement /

ML155 (CID 40225210, SID 85267237) is described as a probe that is able to inhibit the hydrolytic activity of the N370S mutant form of glucocerebrosidase, as well as wild type glucocerebrosidase, in tissue homogenate assays. The probe does not inhibit purified glucocerebrosidase, but the cellular activity of the enzyme is known to be dependent on interactions with other factors, such as Saposin C. Importantly, the probe increased glucocerebrosidase translocation to the lysosome in Gaucher patient-derived fibroblasts homozygous for the N370S mutation, and can be used to study ER-lysosomal trafficking of clinically relevant GC mutants in vitro. This probe may be a useful lead for the clinical development of a chemical chaperone of glucocerebrosidase.

In vitro activity - Selectivity

Bioassay ML156 (IC50)

N370S GC

0.330 uM

Chaperone activity (N370S GC fibroblast)

0.50 uM

Alpha-glucosidase (Anti-Target)

> 57 uM

Alpha-galactosidase (Anti-Target)

> 57 uM

Summary /

ML155 is found to have > 100 fold selective against glucocerebrosidase.  Selectivity was measured against other two lysosomal hydrolases: alpha glucosidase (AID 2578) and alpha galactosidase (AID 2577). All tested compounds from this quinazoline series show selectivity for inhibiting glucocerebrosidase. None of them show inhibitory activity towards alpha glucosidase or alpha galactosidase at concentrations up to 57μM.

Figure 1: Inhibitory curves of ML155 / compound 13 (CID 40225210), against spleen homogenate homozygous for N370S GC using 4-methylumbelliferyl-beta-D-glucopyranoside (curve in black) and resorufin beta-D-glucopyranoside as substrates (curve in blue), and wildtype spleen homogenate using 4 methylumbelliferyl-beta-D glucopyranoside (curve in cyan; AID 2592).

Cellular activity - Chaperone assay

Summary /

To demonstrate chaperone activity, the capacity of ML156 and ML155 to increase the translocation of GC to the lysosome was measured (8, 16, 30, 31). In this experiment, wildtype and mutant fibroblasts were incubated for five days with compound 8i, followed by cell fixation and staining with a selective fluorescent GC antibody. Compounds able to promote trafficking from the ER to the lysosome increased the fluorescent lysosomal signal. DMSO and isofagomine were used as negative and positive controls. Figure 2 shows the increment of signal in both cell lines that resulted from treatment, confirming the chaperone capacity of these compounds.

 

Figure 2: Chaperone activity of compound 13, NCGC00182292 (CID 40225210), and others using wildtype and homozygous, mutant N370S GC fibroblasts. Two genotypes of fibroblasts, fibroblasts homozygous for wildtype GC (top) and fibroblasts homozygous for N370S GC (bottom) were stained both with a Cy3-labeled antibody for GC protein content (first row) and a FITC-labeled antibody specific for lysosomal compartments (LAMP1; second row) after treatment with (1) DMSO vehicle, (2) 10μM Isofagomine (CID 447607), (3) 10μM compound 13, NCGC00182292 (CID 40225210), and (4) 1μM NCGC00159568 (CID 9893924). Several compounds, including isofagomine (CID 447607) and compound 13, NCGC00182292 (CID 40225210), show increased lysosomal GC protein after treatment.

In vitro activity - Mechanism of Action

Summary /

In enzyme kinetics assays, the probe, along with other glucocerebrosidase inhibitors such as isofagomine demonstrated mixed mode inhibition – neither competitive nor non-competitive enzyme kinetics. It is obvious, from x-ray crystal structure studies of isofagomine binding, that the compound binds in the active site. Thus, the current homogenate-based assays might be ill-suited for such kinetic characterization.